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tstd3 thiosulfate sulfurtransferase like domain containing 3 [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108280381, updated on 12-Sep-2024

Summary

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Gene symbol
tstd3
Gene description
thiosulfate sulfurtransferase like domain containing 3
See related
EnsemblRapid:ENSIPUG00020001346
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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See tstd3 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 20 NC_030435.2 (389213..391480, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 20 NC_030435.1 (330709..332965, complement)

Chromosome 20 - NC_030435.2Genomic Context describing neighboring genes Neighboring gene malic enzyme 1, NADP(+)-dependent, cytosolic Neighboring gene PR domain containing 13 Neighboring gene uncharacterized LOC128628813 Neighboring gene ubiquitin specific peptidase 45 Neighboring gene ATPase H+ transporting V0 subunit e2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Zeng Q, et al. Biol Reprod, 2016 Jul. PMID 27307075, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiosulfate sulfurtransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3
Names
thiosulfate sulfurtransferase (rhodanese)-like domain containing 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030435.2 Reference Coco_2.0 Primary Assembly

    Range
    389213..391480 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017495296.2 → XP_017350785.1  thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A2D0T823

  2. XM_017495295.3 → XP_017350784.1  thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A2D0T7C4
    Related
    ENSIPUP00020002869.1, ENSIPUT00020003060.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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