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alg5 ALG5 dolichyl-phosphate beta-glucosyltransferase [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108276693, updated on 20-Aug-2024

Summary

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Gene symbol
alg5
Gene description
ALG5 dolichyl-phosphate beta-glucosyltransferase
See related
EnsemblRapid:ENSIPUG00020028217
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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See alg5 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 16 NC_030431.2 (9865312..9873990)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 16 NC_030431.1 (15174395..15183068)

Chromosome 16 - NC_030431.2Genomic Context describing neighboring genes Neighboring gene chromosome 16 C21orf91 homolog Neighboring gene SPT20 homolog, SAGA complex component Neighboring gene exosome component 8 Neighboring gene SMAD family member 9 Neighboring gene regulatory factor X-associated protein Neighboring gene serine-rich and transmembrane domain-containing protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote. Liu S, et al. BMC Genomics, 2012 Nov 5. PMID 23127152, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-phosphate beta-glucosyltransferase
Names
Dolichyl-phosphate beta-glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030431.2 Reference Coco_2.0 Primary Assembly

    Range
    9865312..9873990
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017488516.3 → XP_017344005.1  dolichyl-phosphate beta-glucosyltransferase

    UniProtKB/TrEMBL
    W5U8Q3
    Related
    ENSIPUP00020052899.1, ENSIPUT00020067980.1
Nucleotide Protein
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