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hint3 histidine triad nucleotide binding protein 3 [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108270166, updated on 20-Aug-2024

Summary

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Gene symbol
hint3
Gene description
histidine triad nucleotide binding protein 3
See related
EnsemblRapid:ENSIPUG00020022263
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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See hint3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 1 NC_030416.2 (23455236..23462686, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 1 NC_030416.1 (22518068..22529218, complement)

Chromosome 1 - NC_030416.2Genomic Context describing neighboring genes Neighboring gene actin-binding Rho-activating protein-like Neighboring gene tRNA methyltransferase 11 homolog Neighboring gene RNA binding motif, single stranded interacting protein Neighboring gene transforming growth factor beta receptor 2b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote. Liu S, et al. BMC Genomics, 2012 Nov 5. PMID 23127152, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histidine triad nucleotide-binding protein 3
Names
Histidine triad nucleotide-binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030416.2 Reference Coco_2.0 Primary Assembly

    Range
    23455236..23462686 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017476576.3 → XP_017332065.1  histidine triad nucleotide-binding protein 3

    UniProtKB/TrEMBL
    W5UGC0
    Related
    ENSIPUP00020044061.1, ENSIPUT00020053778.1

RNA

  1. XR_008397067.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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