U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

mpdu1b mannose-P-dolichol utilization defect 1b [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108268195, updated on 20-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
mpdu1b
Gene description
mannose-P-dolichol utilization defect 1b
See related
EnsemblRapid:ENSIPUG00020026197
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Also known as
mpdu1
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See mpdu1b in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 7 NC_030422.2 (16683013..16687486, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 7 NC_030422.1 (21738547..21743021)

Chromosome 7 - NC_030422.2Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4A1A Neighboring gene small nucleolar RNA SNORD10 Neighboring gene SRY-box transcription factor 19b Neighboring gene metallo-beta-lactamase domain containing 1 Neighboring gene lysophosphatidic acid receptor 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Zeng Q, et al. Biol Reprod, 2016 Jul. PMID 27307075, Free PMC Article
  2. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote. Liu S, et al. BMC Genomics, 2012 Nov 5. PMID 23127152, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mannose-P-dolichol utilization defect 1b
Names
mannose-P-dolichol utilization defect 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030422.2 Reference Coco_2.0 Primary Assembly

    Range
    16683013..16687486 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017473010.3 → XP_017328499.1  mannose-P-dolichol utilization defect 1b

    UniProtKB/TrEMBL
    A0A2D0RD74
    Related
    ENSIPUP00020050070.1, ENSIPUT00020063086.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.