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b3gnt9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108264387, updated on 20-Aug-2024

Summary

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Gene symbol
b3gnt9
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
See related
EnsemblRapid:ENSIPUG00020020346
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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See b3gnt9 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 4 NC_071284.1 (11897405..11901782, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) X NC_030419.1 (11661503..11665662, complement)

Chromosome 4 - NC_071284.1Genomic Context describing neighboring genes Neighboring gene forkhead box L1 Neighboring gene phagosome assembly factor 1 Neighboring gene Bardet-Biedl syndrome 2 Neighboring gene metallothionein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Zeng Q, et al. Biol Reprod, 2016 Jul. PMID 27307075, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_071284.1 Reference Coco_2.0 Primary Assembly

    Range
    11897405..11901782 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017465860.3 → XP_017321349.1  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9

    UniProtKB/TrEMBL
    W5UF49
    Related
    ENSIPUP00020040728.1, ENSIPUT00020049125.1
Nucleotide Protein
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Gene LinkOut

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