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tcap titin-cap (telethonin) [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108261065, updated on 20-Aug-2024

Summary

Gene symbol
tcap
Gene description
titin-cap (telethonin)
See related
EnsemblRapid:ENSIPUG00020021242
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Also known as
Telethonin
Orthologs
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Genomic context

See tcap in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 2 NC_030417.2 (31858156..31859708, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 2 NC_030417.1 (7651065..7652627)

Chromosome 2 - NC_030417.2Genomic Context describing neighboring genes Neighboring gene reprimo-like Neighboring gene uncharacterized protein c17orf72-like protein Neighboring gene synaptogyrin 1a Neighboring gene family with sequence similarity 171 member A2a

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
PubMed 
enables titin Z domain binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables titin binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in cardiac muscle contraction IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in cardiac muscle tissue morphogenesis IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in cardiac myofibril assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in detection of muscle stretch IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in sarcomerogenesis IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in skeletal muscle contraction IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in skeletal muscle myosin thick filament assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in skeletal muscle thin filament assembly IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030417.2 Reference Coco_2.0 Primary Assembly

    Range
    31858156..31859708 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017461909.3XP_017317398.1  telethonin

    UniProtKB/TrEMBL
    W5UK31
    Related
    ENSIPUP00020042351.1, ENSIPUT00020051397.1