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hs6st1b heparan sulfate 6-O-sulfotransferase 1b [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108256600, updated on 20-Aug-2024

Summary

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Gene symbol
hs6st1b
Gene description
heparan sulfate 6-O-sulfotransferase 1b
See related
EnsemblRapid:ENSIPUG00020012569
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
zebrafish all
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Genomic context

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See hs6st1b in Genome Data Viewer
Location:
chromosome: 23
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 23 NC_030438.2 (1692615..1780552)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 23 NC_030438.1 (1679090..1766724)

Chromosome 23 - NC_030438.2Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 4 isoform 1, mitochondrial Neighboring gene BCL2 apoptosis regulator a Neighboring gene eph-like kinase 1 Neighboring gene chemokine (C-C motif) ligand 32b, duplicate 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 1-B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030438.2 Reference Coco_2.0 Primary Assembly

    Range
    1692615..1780552
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017453648.3 → XP_017309137.1  heparan-sulfate 6-O-sulfotransferase 1-B

    UniProtKB/TrEMBL
    W5UDJ6
    Related
    ENSIPUP00020024976.1, ENSIPUT00020029295.1
Nucleotide Protein
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Molecular Biology Databases