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mmadhca metabolism of cobalamin associated Da [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108246485, updated on 10-Apr-2024

Summary

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Gene symbol
mmadhca
Gene description
metabolism of cobalamin associated Da
See related
EnsemblRapid:ENSKMAG00010001036
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
zebrafish all
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Genomic context

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See mmadhca in Genome Data Viewer
Location:
chromosome: LG23
Exon count:
8
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG23 NC_051452.1 (413530..418641, complement)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094458.1 (594321..599435)

Linkage Group LG23 - NC_051452.1Genomic Context describing neighboring genes Neighboring gene rho GTPase-activating protein 20 Neighboring gene paraspeckle component 1 Neighboring gene ly6/PLAUR domain-containing protein 6-like Neighboring gene Rho family GTPase 3a Neighboring gene uncharacterized LOC108246492

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
metabolism of cobalamin associated Da

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051452.1 Reference ASM164957v2 Primary Assembly

    Range
    413530..418641 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017434058.3 → XP_017289547.1  metabolism of cobalamin associated Da

    UniProtKB/TrEMBL
    A0A3Q3G0N8
    Related
    ENSKMAP00010001827.1, ENSKMAT00010001993.1
    Conserved Domains (1) summary
    pfam10229
    Location:27 → 288
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_017434059.3 → XP_017289548.1  metabolism of cobalamin associated Da

    UniProtKB/TrEMBL
    A0A3Q3G0N8
    Conserved Domains (1) summary
    pfam10229
    Location:27 → 288
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
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