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mepce methylphosphate capping enzyme [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108245246, updated on 10-Apr-2024

Summary

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Gene symbol
mepce
Gene description
methylphosphate capping enzyme
See related
EnsemblRapid:ENSKMAG00010013159
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
zebrafish all
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Genomic context

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See mepce in Genome Data Viewer
Location:
chromosome: LG13
Exon count:
6
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG13 NC_051442.1 (13983520..13991579, complement)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094405.1 (916039..923030)

Linkage Group LG13 - NC_051442.1Genomic Context describing neighboring genes Neighboring gene sperm associated antigen 7 Neighboring gene defensin, beta-like 2 Neighboring gene uncharacterized LOC119617621 Neighboring gene serine/threonine-protein kinase PAK 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables snRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in snRNA modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
7SK snRNA methylphosphate capping enzyme

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051442.1 Reference ASM164957v2 Primary Assembly

    Range
    13983520..13991579 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025009537.2 → XP_024865305.1  7SK snRNA methylphosphate capping enzyme

    UniProtKB/TrEMBL
    A0A3Q3ABR6
    Related
    ENSKMAP00010028541.1, ENSKMAT00010029783.1
    Conserved Domains (2) summary
    pfam06859
    Location:608 → 715
    Bin3; Bicoid-interacting protein 3 (Bin3)
    pfam13649
    Location:411 → 463
    Methyltransf_25; Methyltransferase domain

  2. XM_017432006.3 → XP_017287495.1  7SK snRNA methylphosphate capping enzyme

    UniProtKB/TrEMBL
    A0A3Q3ABR6
    Conserved Domains (2) summary
    pfam06859
    Location:608 → 715
    Bin3; Bicoid-interacting protein 3 (Bin3)
    pfam13649
    Location:411 → 463
    Methyltransf_25; Methyltransferase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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