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ctbp1 C-terminal binding protein 1 [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108240520, updated on 10-Apr-2024

Summary

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Gene symbol
ctbp1
Gene description
C-terminal binding protein 1
See related
EnsemblRapid:ENSKMAG00010005026
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
zebrafish all
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Genomic context

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See ctbp1 in Genome Data Viewer
Location:
chromosome: LG9
Exon count:
12
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG9 NC_051438.1 (15469249..15483543, complement)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094316.1 (909901..924183)

Linkage Group LG9 - NC_051438.1Genomic Context describing neighboring genes Neighboring gene lysine (K)-specific demethylase 3B Neighboring gene uncharacterized LOC108240571 Neighboring gene spondin 2a, extracellular matrix protein Neighboring gene family with sequence similarity 53 member C Neighboring gene 5-phosphohydroxy-L-lysine phospho-lyase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051438.1 Reference ASM164957v2 Primary Assembly

    Range
    15469249..15483543 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017424061.3 → XP_017279550.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2ZT56, A0A3Q2ZV17
    Related
    ENSKMAP00010011123.1, ENSKMAT00010011695.1

  2. XM_017424062.3 → XP_017279551.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2ZT56, A0A3Q2ZV17

  3. XM_017424064.3 → XP_017279553.1  C-terminal-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2ZV02, A0A3Q2ZV17
    Related
    ENSKMAP00010011110.1, ENSKMAT00010011683.1
Nucleotide Protein
Heading Accession and Version

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