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rps25 ribosomal protein S25 [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108238133, updated on 10-Apr-2024

Summary

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Gene symbol
rps25
Gene description
ribosomal protein S25
See related
EnsemblRapid:ENSKMAG00010008581
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
human zebrafish all
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Genomic context

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See rps25 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
5
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG2 NC_051431.1 (19993000..19996331, complement)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094291.1 (1041096..1044427, complement)

Linkage Group LG2 - NC_051431.1Genomic Context describing neighboring genes Neighboring gene sacsin molecular chaperone Neighboring gene sarcoglycan, gamma Neighboring gene trafficking protein particle complex subunit 4 Neighboring gene solute carrier family 37 member 4a Neighboring gene cilia and flagella associated protein 45

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S25

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051431.1 Reference ASM164957v2 Primary Assembly

    Range
    19993000..19996331 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017420008.2 → XP_017275497.1  40S ribosomal protein S25

    UniProtKB/TrEMBL
    A0A3Q2ZCH8
    Related
    ENSKMAP00010018576.1, ENSKMAT00010019271.1
Nucleotide Protein
Heading Accession and Version

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