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cep104 centrosomal protein 104 [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108233132, updated on 10-Apr-2024

Summary

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Gene symbol
cep104
Gene description
centrosomal protein 104
See related
EnsemblRapid:ENSKMAG00010013524
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
human zebrafish all
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Genomic context

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See cep104 in Genome Data Viewer
Location:
chromosome: LG8
Exon count:
22
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG8 NC_051437.1 (23203788..23230156)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094258.1 (882957..908819)

Linkage Group LG8 - NC_051437.1Genomic Context describing neighboring genes Neighboring gene L-rhamnose-binding lectin SML Neighboring gene leucine rich repeat containing 47 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, like Neighboring gene linkage group 8 C1orf174 homolog Neighboring gene DNA fragmentation factor, beta polypeptide (caspase-activated DNase)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 104 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051437.1 Reference ASM164957v2 Primary Assembly

    Range
    23203788..23230156
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017411378.3 → XP_017266867.1  centrosomal protein of 104 kDa isoform X1

    UniProtKB/TrEMBL
    A0A3Q2ZNF2
    Related
    ENSKMAP00010029430.1, ENSKMAT00010030675.1

  2. XM_017411380.3 → XP_017266869.1  centrosomal protein of 104 kDa isoform X3

  3. XM_017411379.3 → XP_017266868.1  centrosomal protein of 104 kDa isoform X2

  4. XM_025004882.2 → XP_024860650.1  centrosomal protein of 104 kDa isoform X4

    Conserved Domains (2) summary
    sd00044
    Location:344 → 368
    HEAT; HEAT repeat [structural motif]
    pfam12348
    Location:332 → 451
    CLASP_N; CLASP N terminal
Nucleotide Protein
Heading Accession and Version

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