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kirrel1b kirre like nephrin family adhesion molecule 1b [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108232926, updated on 10-Apr-2024

Summary

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Gene symbol
kirrel1b
Gene description
kirre like nephrin family adhesion molecule 1b
See related
EnsemblRapid:ENSKMAG00010019932
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
zebrafish all
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Genomic context

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See kirrel1b in Genome Data Viewer
Location:
chromosome: LG20
Exon count:
15
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG20 NC_051449.1 (3573142..3655689)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094257.1 (948171..1032502)

Linkage Group LG20 - NC_051449.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene cell adhesion molecule 3 Neighboring gene uncharacterized LOC119618066 Neighboring gene uncharacterized LOC108232810

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1b
Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051449.1 Reference ASM164957v2 Primary Assembly

    Range
    3573142..3655689
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017411066.2 → XP_017266555.1  kin of IRRE-like protein 1b isoform X1

    Related
    ENSKMAP00010043170.1, ENSKMAT00010045669.1

  2. XM_017411067.2 → XP_017266556.1  kin of IRRE-like protein 1b isoform X2

    UniProtKB/TrEMBL
    A0A3Q3GIE7
    Related
    ENSKMAP00010043164.1, ENSKMAT00010045663.1
Nucleotide Protein
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