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LOC108225740 scopoletin glucosyltransferase [ Daucus carota subsp. sativus ]

Gene ID: 108225740, updated on 19-Jul-2024

Summary

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Gene symbol
LOC108225740
Gene description
scopoletin glucosyltransferase
Locus tag
DCAR_022006
Gene type
protein coding
RefSeq status
MODEL
Organism
Daucus carota subsp. sativus (sub-species: sativus)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus; Daucus sect. Daucus
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Genomic context

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See LOC108225740 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_03 current DH1 v3.0 (GCF_001625215.2) 6 NC_030386.2 (21786264..21787942)
100 previous assembly ASM162521v1 (GCF_001625215.1) 6 NC_030386.1 (17628488..17630357)

Chromosome 6 - NC_030386.2Genomic Context describing neighboring genes Neighboring gene polyadenylate-binding protein 2 Neighboring gene CBS domain-containing protein CBSX1, chloroplastic Neighboring gene MDIS1-interacting receptor like kinase 2-like Neighboring gene protein IRX15-LIKE

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
scopoletin glucosyltransferase
Names
UDP-glycosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001625215.2-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DH1 v3.0 Primary Assembly

Genomic

  1. NC_030386.2 Reference DH1 v3.0 Primary Assembly

    Range
    21786264..21787942
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017400679.2 → XP_017256168.1  scopoletin glucosyltransferase

    UniProtKB/TrEMBL
    A0A161YD54
Nucleotide Protein
Heading Accession and Version

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