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LOC108216697 laccase-2 [ Daucus carota subsp. sativus ]

Gene ID: 108216697, updated on 19-Jul-2024

Summary

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Gene symbol
LOC108216697
Gene description
laccase-2
Locus tag
DCAR_015633
Gene type
protein coding
RefSeq status
MODEL
Organism
Daucus carota subsp. sativus (sub-species: sativus)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus; Daucus sect. Daucus
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Genomic context

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See LOC108216697 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_03 current DH1 v3.0 (GCF_001625215.2) 4 NC_030384.2 (25591385..25594173)
100 previous assembly ASM162521v1 (GCF_001625215.1) 4 NC_030384.1 (9705953..9708676)

Chromosome 4 - NC_030384.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135152273 Neighboring gene pumilio homolog 2 Neighboring gene uncharacterized LOC108217783 Neighboring gene uncharacterized LOC108215981

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydroquinone:oxygen oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lignin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laccase-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001625215.2-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DH1 v3.0 Primary Assembly

Genomic

  1. NC_030384.2 Reference DH1 v3.0 Primary Assembly

    Range
    25591385..25594173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017389528.2 → XP_017245017.2  laccase-2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases