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LOC108216445 pectinesterase 2 [ Daucus carota subsp. sativus ]

Gene ID: 108216445, updated on 19-Jul-2024

Summary

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Gene symbol
LOC108216445
Gene description
pectinesterase 2
Locus tag
DCAR_015873
Gene type
protein coding
RefSeq status
MODEL
Organism
Daucus carota subsp. sativus (sub-species: sativus)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus; Daucus sect. Daucus
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Genomic context

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See LOC108216445 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_03 current DH1 v3.0 (GCF_001625215.2) 4 NC_030384.2 (21821679..21823875, complement)
100 previous assembly ASM162521v1 (GCF_001625215.1) 4 NC_030384.1 (5962111..5964277, complement)

Chromosome 4 - NC_030384.2Genomic Context describing neighboring genes Neighboring gene zinc finger protein ZAT9 Neighboring gene gibberellin 20 oxidase 1 Neighboring gene uncharacterized LOC108216448 Neighboring gene uncharacterized LOC108216689

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pectinesterase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001625215.2-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DH1 v3.0 Primary Assembly

Genomic

  1. NC_030384.2 Reference DH1 v3.0 Primary Assembly

    Range
    21821679..21823875 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017389212.2 → XP_017244701.1  pectinesterase 2

    UniProtKB/TrEMBL
    A0A165A1M7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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