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LOC108210098 digalactosyldiacylglycerol synthase 2, chloroplastic [ Daucus carota subsp. sativus ]

Gene ID: 108210098, updated on 18-Jul-2024

Summary

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Gene symbol
LOC108210098
Gene description
digalactosyldiacylglycerol synthase 2, chloroplastic
Locus tag
DCAR_006913
Gene type
protein coding
RefSeq status
MODEL
Organism
Daucus carota subsp. sativus (sub-species: sativus)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus; Daucus sect. Daucus
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Genomic context

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See LOC108210098 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_03 current DH1 v3.0 (GCF_001625215.2) 2 NC_030382.2 (45466258..45472024, complement)
100 previous assembly ASM162521v1 (GCF_001625215.1) 2 NC_030382.1 (29930112..29935916, complement)

Chromosome 2 - NC_030382.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135150762 Neighboring gene E3 ubiquitin-protein ligase At4g11680 Neighboring gene uncharacterized LOC108208362 Neighboring gene uncharacterized LOC108206255

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables digalactosyldiacylglycerol synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
digalactosyldiacylglycerol synthase 2, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001625215.2-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DH1 v3.0 Primary Assembly

Genomic

  1. NC_030382.2 Reference DH1 v3.0 Primary Assembly

    Range
    45466258..45472024 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017381364.2 → XP_017236853.1  digalactosyldiacylglycerol synthase 2, chloroplastic

    UniProtKB/TrEMBL
    A0A166E4D3
Nucleotide Protein
Heading Accession and Version

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