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LOC108202707 uncharacterized LOC108202707 [ Daucus carota subsp. sativus ]

Gene ID: 108202707, updated on 18-Jul-2024

Summary

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Gene symbol
LOC108202707
Gene description
uncharacterized LOC108202707
Locus tag
DCAR_029164
Gene type
protein coding
RefSeq status
MODEL
Organism
Daucus carota subsp. sativus (sub-species: sativus)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus; Daucus sect. Daucus
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Genomic context

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See LOC108202707 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_03 current DH1 v3.0 (GCF_001625215.2) 9 NC_030389.2 (2606589..2617585, complement)
100 previous assembly ASM162521v1 (GCF_001625215.1) 9 NC_030389.1 (2391452..2402742, complement)

Chromosome 9 - NC_030389.2Genomic Context describing neighboring genes Neighboring gene regulator of nonsense transcripts UPF3 Neighboring gene mitogen-activated protein kinase kinase kinase 17 Neighboring gene protein FAR1-RELATED SEQUENCE 5-like Neighboring gene uncharacterized LOC135149242

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucosylceramidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC108202707

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001625215.2-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DH1 v3.0 Primary Assembly

Genomic

  1. NC_030389.2 Reference DH1 v3.0 Primary Assembly

    Range
    2606589..2617585 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017371224.2 → XP_017226713.1  uncharacterized protein LOC108202707 isoform X1

    UniProtKB/TrEMBL
    A0A175YEB4

  2. XM_064084367.1 → XP_063940437.1  uncharacterized protein LOC108202707 isoform X2

Nucleotide Protein
Heading Accession and Version

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