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LOC108202663 probable galacturonosyltransferase 4 [ Daucus carota subsp. sativus ]

Gene ID: 108202663, updated on 18-Jul-2024

Summary

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Gene symbol
LOC108202663
Gene description
probable galacturonosyltransferase 4
Locus tag
DCAR_030824
Gene type
protein coding
RefSeq status
MODEL
Organism
Daucus carota subsp. sativus (sub-species: sativus)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus; Daucus sect. Daucus
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Genomic context

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See LOC108202663 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_03 current DH1 v3.0 (GCF_001625215.2) 9 NC_030389.2 (42476888..42481095, complement)
100 previous assembly ASM162521v1 (GCF_001625215.1) 9 NC_030389.1 (30178186..30182812, complement)

Chromosome 9 - NC_030389.2Genomic Context describing neighboring genes Neighboring gene phosphoserine aminotransferase 2, chloroplastic Neighboring gene probable E3 ubiquitin-protein ligase EDA40 Neighboring gene probable polyamine transporter At3g13620 Neighboring gene ATP-dependent 6-phosphofructokinase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001625215.2-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DH1 v3.0 Primary Assembly

Genomic

  1. NC_030389.2 Reference DH1 v3.0 Primary Assembly

    Range
    42476888..42481095 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064084317.1 → XP_063940387.1  probable galacturonosyltransferase 4

Nucleotide Protein
Heading Accession and Version

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