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CGB3 chorionic gonadotropin subunit beta 3 [ Homo sapiens (human) ]

Gene ID: 1082, updated on 3-Dec-2023

Summary

Official Symbol
CGB3provided by HGNC
Official Full Name
chorionic gonadotropin subunit beta 3provided by HGNC
Primary source
HGNC:HGNC:1886
See related
Ensembl:ENSG00000104827 MIM:118860; AllianceGenome:HGNC:1886
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CGB; LHB; CGB5; CGB7; CGB8; hCGB
Summary
This gene is a member of the glycoprotein hormone beta chain family and encodes the beta 3 subunit of chorionic gonadotropin (CG). Glycoprotein hormones are heterodimers consisting of a common alpha subunit and an unique beta subunit which confers biological specificity. CG is produced by the trophoblastic cells of the placenta and stimulates the ovaries to synthesize the steroids that are essential for the maintenance of pregnancy. The beta subunit of CG is encoded by 6 genes which are arranged in tandem and inverted pairs on chromosome 19q13.3 and contiguous with the luteinizing hormone beta subunit gene. [provided by RefSeq, Jul 2008]
Expression
Restricted expression toward placenta (RPKM 30.5) See more
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Genomic context

Location:
19q13.33
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (49022869..49024333, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (52017651..52019115, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (49526126..49527590, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene RuvB like AAA ATPase 2 Neighboring gene Sharpr-MPRA regulatory region 164 Neighboring gene uncharacterized LOC124904738 Neighboring gene luteinizing hormone subunit beta Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14924 Neighboring gene stabilizer of axonemal microtubules 3 Neighboring gene neurotrophin 6 alpha (pseudogene) Neighboring gene neurotrophin 6 gamma (pseudogene)

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables hormone activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in apoptotic process TAS
Traceable Author Statement
more info
PubMed 
involved_in cell-cell signaling TAS
Traceable Author Statement
more info
PubMed 
involved_in female gamete generation TAS
Traceable Author Statement
more info
PubMed 
involved_in hormone-mediated signaling pathway NAS
Non-traceable Author Statement
more info
PubMed 
involved_in signal transduction TAS
Traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular region TAS
Traceable Author Statement
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of pituitary gonadotropin complex IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
choriogonadotropin subunit beta 3
Names
CG-beta
chorionic gonadotrophin chain beta
chorionic gonadotropin beta 3 subunit
chorionic gonadotropin beta chain
chorionic gonadotropin beta subunit 3
chorionic gonadotropin chain beta
chorionic gonadotropin, beta polypeptide
luteinizing hormone beta subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_000737.5NP_000728.1  choriogonadotropin subunit beta 3 precursor

    See identical proteins and their annotated locations for NP_000728.1

    Status: REVIEWED

    Source sequence(s)
    AK291552, BC106059
    Consensus CDS
    CCDS12749.1
    UniProtKB/Swiss-Prot
    A1A5E0, B9ZVP5, P01233, P0DN86, Q13991, Q14000, Q3KPI3, Q3SY41, Q8WTT5, Q8WXL1, Q8WXL2, Q8WXL3, Q8WXL4
    UniProtKB/TrEMBL
    A0A0F7RPU2, A0A0F7RQP8
    Related
    ENSP00000349954.2, ENST00000357383.4
    Conserved Domains (1) summary
    smart00068
    Location:25131
    GHB; Glycoprotein hormone beta chain homologues

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    49022869..49024333 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    52017651..52019115 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)