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LOC108194130 sulfoquinovosyl transferase SQD2 [ Daucus carota subsp. sativus ]

Gene ID: 108194130, updated on 18-Jul-2024

Summary

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Gene symbol
LOC108194130
Gene description
sulfoquinovosyl transferase SQD2
Locus tag
DCAR_024027
Gene type
protein coding
RefSeq status
MODEL
Organism
Daucus carota subsp. sativus (sub-species: sativus)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus; Daucus sect. Daucus
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Genomic context

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See LOC108194130 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_03 current DH1 v3.0 (GCF_001625215.2) 7 NC_030387.2 (7927829..7931522, complement)
100 previous assembly ASM162521v1 (GCF_001625215.1) 7 NC_030387.1 (8107668..8111461, complement)

Chromosome 7 - NC_030387.2Genomic Context describing neighboring genes Neighboring gene cold-responsive protein kinase 1 Neighboring gene protein WHAT'S THIS FACTOR 1 homolog, chloroplastic-like Neighboring gene uncharacterized LOC108194576 Neighboring gene glycerol-3-phosphate 2-O-acyltransferase 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfoquinovosyl transferase SQD2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001625215.2-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DH1 v3.0 Primary Assembly

Genomic

  1. NC_030387.2 Reference DH1 v3.0 Primary Assembly

    Range
    7927829..7931522 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017361032.2 → XP_017216521.1  sulfoquinovosyl transferase SQD2

    UniProtKB/TrEMBL
    A0AAF0XH60
Nucleotide Protein
Heading Accession and Version

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