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LOC108193300 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 [ Daucus carota subsp. sativus ]

Gene ID: 108193300, updated on 18-Jul-2024

Summary

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Gene symbol
LOC108193300
Gene description
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
Locus tag
DCAR_025233
Gene type
protein coding
RefSeq status
MODEL
Organism
Daucus carota subsp. sativus (sub-species: sativus)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus; Daucus sect. Daucus
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Genomic context

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See LOC108193300 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_03 current DH1 v3.0 (GCF_001625215.2) 7 NC_030387.2 (30068209..30072288)
100 previous assembly ASM162521v1 (GCF_001625215.1) 7 NC_030387.1 (25015984..25020073)

Chromosome 7 - NC_030387.2Genomic Context describing neighboring genes Neighboring gene delta(8)-fatty-acid desaturase Neighboring gene delta(8)-fatty-acid desaturase Neighboring gene uncharacterized LOC108195539 Neighboring gene F-box/kelch-repeat protein At3g61590-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rhamnogalacturonan II biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001625215.2-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DH1 v3.0 Primary Assembly

Genomic

  1. NC_030387.2 Reference DH1 v3.0 Primary Assembly

    Range
    30068209..30072288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017359902.2 → XP_017215391.1  UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4

    UniProtKB/TrEMBL
    A0A164TYD7
Nucleotide Protein
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Molecular Biology Databases