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Gm46842 predicted gene, 46842 [ Mus musculus (house mouse) ]

Gene ID: 108168926, updated on 17-Aug-2024

Summary

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Official Symbol
Gm46842provided by MGI
Official Full Name
predicted gene, 46842provided by MGI
Primary source
MGI:MGI:5826479
See related
AllianceGenome:MGI:5826479
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm46842 in Genome Data Viewer
Location:
4 A1; 4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (8905258..8910558, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (8903418..8910862, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene PRP3 pre-mRNA processing factor 3 homolog pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chr4:8636314-8636615 Neighboring gene chromodomain helicase DNA binding protein 7 Neighboring gene predicted gene, 46841 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:8726721-8726953 Neighboring gene STARR-positive B cell enhancer ABC_E7954 Neighboring gene STARR-positive B cell enhancer ABC_E10226 Neighboring gene predicted gene, 54232 Neighboring gene ribosomal protein S18, pseudogene 2 Neighboring gene predicted gene, 34428

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    8905258..8910558 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001784229.3 RNA Sequence

  2. XR_001784227.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version