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Spin2g spindlin family, member 2G [ Mus musculus (house mouse) ]

Gene ID: 108168468, updated on 17-Aug-2024

Summary

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Official Symbol
Spin2gprovided by MGI
Official Full Name
spindlin family, member 2Gprovided by MGI
Primary source
MGI:MGI:5434937
See related
Ensembl:ENSMUSG00000095659 AllianceGenome:MGI:5434937
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Spi; Gm21582; Spin2-ps5
Summary
Predicted to enable methylated histone binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be active in cytosol and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Spin2g in Genome Data Viewer
Location:
X A3.2; X
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (33656424..33657916, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (34237100..34238592, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 17858 Neighboring gene STARR-seq mESC enhancer starr_46987 Neighboring gene BTB domain containing 35, family member 9 Neighboring gene predicted gene, 46672 Neighboring gene BTB domain containing 35, family member 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables methylated histone binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
spindlin-2A-like
Names
spindlin family, member 2, pseudogene 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    33656424..33657916 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017318673.1 → XP_017174162.1  spindlin-2A-like

    UniProtKB/TrEMBL
    A0A0N4SW15, A0A140T8V6
    Related
    ENSMUSP00000145332.2, ENSMUST00000203586.2
    Conserved Domains (1) summary
    pfam02513
    Location:29 → 78
    Spin-Ssty; Spin/Ssty Family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases