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Smim34 small integral membrane protein 34 [ Mus musculus (house mouse) ]

Gene ID: 108168308, updated on 17-Aug-2024

Summary

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Official Symbol
Smim34provided by MGI
Official Full Name
small integral membrane protein 34provided by MGI
Primary source
MGI:MGI:5826205
See related
AllianceGenome:MGI:5826205
Gene type
protein coding
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm46568
Summary
Orthologous to human SMIM34 (small integral membrane protein 34). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in kidney adult (RPKM 1.3), testis adult (RPKM 0.5) and 4 other tissues See more
Orthologs
human all
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Genomic context

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See Smim34 in Genome Data Viewer
Location:
16 C4; 16
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (92120810..92130109, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (92323922..92333221, complement)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700048M11 gene Neighboring gene small integral membrane protein 11 Neighboring gene family with sequence similarity 243 Neighboring gene VISTA enhancers mm113 and mm769 Neighboring gene VISTA enhancer mm768 Neighboring gene potassium voltage-gated channel, Isk-related subfamily, member 1 Neighboring gene predicted gene, 30163 Neighboring gene predicted gene, 29805

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
small integral membrane protein 34

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001370888.1 → NP_001357817.1  small integral membrane protein 34

    Status: INFERRED

    Source sequence(s)
    AC162305

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    92120810..92130109 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017317183.1 → XP_017172672.1  small integral membrane protein 34 isoform X1

RNA

  1. XR_001782000.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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