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Gm46558 predicted gene, 46558 [ Mus musculus (house mouse) ]

Gene ID: 108168297, updated on 17-Aug-2024

Summary

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Official Symbol
Gm46558provided by MGI
Official Full Name
predicted gene, 46558provided by MGI
Primary source
MGI:MGI:5826195
See related
AllianceGenome:MGI:5826195
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in subcutaneous fat pad adult (RPKM 2.5), genital fat pad adult (RPKM 2.3) and 22 other tissues See more
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Genomic context

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Location:
16 C3.3; 16
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (85696399..85702085)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (85899800..85905197)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_41386 Neighboring gene RIKEN cDNA 4930556C24 gene Neighboring gene STARR-seq mESC enhancer starr_41388 Neighboring gene STARR-seq mESC enhancer starr_41389 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 1 Neighboring gene STARR-seq mESC enhancer starr_41390 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 5 Neighboring gene STARR-seq mESC enhancer starr_41391 Neighboring gene predicted gene, 32357 Neighboring gene predicted gene, 32461

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    85696399..85702085
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001781962.3 RNA Sequence

  2. XR_003951855.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version