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Gm46458 predicted gene, 46458 [ Mus musculus (house mouse) ]

Gene ID: 108168167, updated on 17-Aug-2024

Summary

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Official Symbol
Gm46458provided by MGI
Official Full Name
predicted gene, 46458provided by MGI
Primary source
MGI:MGI:5826095
See related
AllianceGenome:MGI:5826095
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in heart adult (RPKM 1.0) and testis adult (RPKM 0.2) See more
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Genomic context

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See Gm46458 in Genome Data Viewer
Location:
14 D1; 14
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (63597452..63608602, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (63360003..63371153, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene GATA binding protein 4 Neighboring gene STARR-seq mESC enhancer starr_36921 Neighboring gene predicted gene 4151 Neighboring gene VISTA enhancer mm245 Neighboring gene predicted gene, 36165 Neighboring gene B lymphoid kinase Neighboring gene STARR-positive B cell enhancer ABC_E5448 Neighboring gene family with sequence similarity 167, member A Neighboring gene STARR-seq mESC enhancer starr_36924

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_168492.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC090496

  2. NR_168493.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC090496

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    63597452..63608602 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version