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Gm46349 predicted gene, 46349 [ Mus musculus (house mouse) ]

Gene ID: 108167999, updated on 17-Aug-2024

Summary

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Official Symbol
Gm46349provided by MGI
Official Full Name
predicted gene, 46349provided by MGI
Primary source
MGI:MGI:5825986
See related
AllianceGenome:MGI:5825986
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in CNS E11.5 (RPKM 135.2), CNS E14 (RPKM 41.4) and 9 other tissues See more
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Genomic context

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See Gm46349 in Genome Data Viewer
Location:
12 B2; 12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (44002680..44003462, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (43955897..43960922, complement)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 33384 Neighboring gene STARR-seq mESC enhancer starr_32019 Neighboring gene predicted gene, 26326 Neighboring gene predicted gene, 57591 Neighboring gene STARR-seq mESC enhancer starr_32020 Neighboring gene STARR-seq mESC enhancer starr_32021 Neighboring gene STARR-seq mESC enhancer starr_32022 Neighboring gene STARR-seq mESC enhancer starr_32023 Neighboring gene STARR-seq mESC enhancer starr_32024 Neighboring gene STARR-seq mESC enhancer starr_32025 Neighboring gene STARR-seq mESC enhancer starr_32026 Neighboring gene STARR-seq mESC enhancer starr_32027 Neighboring gene ribosomal protein S2 pseudogene Neighboring gene DnaJ heat shock protein family (Hsp40) member B9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    44002680..44003462 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004937589.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version