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Gm12236 predicted gene 12236 [ Mus musculus (house mouse) ]

Gene ID: 108167901, updated on 17-Aug-2024

Summary

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Official Symbol
Gm12236provided by MGI
Official Full Name
predicted gene 12236provided by MGI
Primary source
MGI:MGI:3651548
See related
AllianceGenome:MGI:3651548
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in subcutaneous fat pad adult (RPKM 1.2), cerebellum adult (RPKM 0.7) and 5 other tissues See more
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Genomic context

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See Gm12236 in Genome Data Viewer
Location:
11 33.12 cM; 11 B1.3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (55405749..55427119)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (55514923..55536293)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene 12238 Neighboring gene G3BP stress granule assembly factor 1 Neighboring gene microRNA 7652 Neighboring gene STARR-seq mESC enhancer starr_29547 Neighboring gene glycine receptor, alpha 1 subunit Neighboring gene STARR-seq mESC enhancer starr_29550 Neighboring gene STARR-seq mESC enhancer starr_29551 Neighboring gene STARR-seq mESC enhancer starr_29552 Neighboring gene STARR-seq mESC enhancer starr_29553 Neighboring gene predicted gene, 50502 Neighboring gene STARR-seq mESC enhancer starr_29554 Neighboring gene predicted gene 12239 Neighboring gene STARR-seq mESC enhancer starr_29558 Neighboring gene neuromedin U receptor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    55405749..55427119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001780212.2 RNA Sequence

  2. XR_001780216.2 RNA Sequence

  3. XR_001780213.2 RNA Sequence

  4. XR_001780214.2 RNA Sequence

  5. XR_001780215.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version