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LOC108153705 delta-sarcoglycan [ Drosophila miranda ]

Gene ID: 108153705, updated on 10-May-2024

Summary

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Gene symbol
LOC108153705
Gene description
delta-sarcoglycan
See related
EnsemblRapid:LOC108153705
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila miranda
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See LOC108153705 in Genome Data Viewer
Location:
chromosome: XR
Exon count:
6
Annotation release Status Assembly Chr Location
102 current D.miranda_PacBio2.1 (GCF_003369915.1) XR NC_046674.1 (28225691..28236343)
101 previous assembly DroMir_2.2 (GCF_000269505.1) XR NC_030303.1 (3080715..3091075, complement)

Chromosome XR - NC_046674.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108150793 Neighboring gene uncharacterized LOC117186575 Neighboring gene trypsin-3 Neighboring gene transfer RNA valine (anticodon AAC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila miranda Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference D.miranda_PacBio2.1

Genomic

  1. NC_046674.1 Reference D.miranda_PacBio2.1

    Range
    28225691..28236343
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017283830.2 → XP_017139319.1  delta-sarcoglycan

    Related
    XP_017139319.1, XM_017283830.2
Nucleotide Protein Strain
Heading Accession and Version

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