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SMAC4_01799 uncharacterized protein [ Sordaria macrospora ]

Gene ID: 10806239, updated on 10-Jul-2024

Summary

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Gene symbol
SMAC4_01799
Gene description
uncharacterized protein
Locus tag
SMAC4_01799
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sordaria macrospora (strain: SN1693)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Sordaria
Old locus tag
SMAC_01799
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Genomic context

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See SMAC4_01799 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_089373.1 (1190559..1197490, complement)

Chromosome 3 - NC_089373.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089373.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_089373.1 Reference assembly

    Range
    1190559..1197490 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003348728.2 → XP_003348776.1  uncharacterized protein SMAC4_01799 [Sordaria macrospora]

    See identical proteins and their annotated locations for XP_003348776.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S9A0I3, F7VRW5
    Conserved Domains (5) summary
    pfam09606
    Location:1619 → 1747
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam03142
    Location:1067 → 1575
    Chitin_synth_2; Chitin synthase
    pfam00173
    Location:820 → 894
    Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain
    pfam08766
    Location:1764 → 1818
    DEK_C; DEK C terminal domain
    cl22853
    Location:28 → 604
    Motor_domain; Myosin and Kinesin motor domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases