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SMAC4_06415 uncharacterized protein [ Sordaria macrospora ]

Gene ID: 10802069, updated on 10-Jul-2024

Summary

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Gene symbol
SMAC4_06415
Gene description
uncharacterized protein
Locus tag
SMAC4_06415
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sordaria macrospora (strain: SN1693)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Sordaria
Old locus tag
SMAC_06415
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Genomic context

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See SMAC4_06415 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Sequence:
Chromosome: 6; NC_089376.1 (1922254..1923534)

Chromosome 6 - NC_089376.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089376.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 18S rRNA aminocarboxypropyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_089376.1 Reference assembly

    Range
    1922254..1923534
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003344712.1 → XP_003344760.1  uncharacterized protein SMAC4_06415 [Sordaria macrospora]

    See identical proteins and their annotated locations for XP_003344760.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S8ZD57, F7W6Q7
    Conserved Domains (2) summary
    pfam04034
    Location:101 → 226
    Ribo_biogen_C; Ribosome biogenesis protein, C-terminal
    pfam04068
    Location:63 → 97
    RLI; Possible Fer4-like domain in RNase L inhibitor, RLI
Nucleotide Protein
Heading Accession and Version

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