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LOC108002258 dnaJ homolog subfamily B member 6-like [ Apis cerana (Asiatic honeybee) ]

Gene ID: 108002258, updated on 1-Oct-2024

Summary

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Gene symbol
LOC108002258
Gene description
dnaJ homolog subfamily B member 6-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis cerana
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Orthologs
honey bee all
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Genomic context

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See LOC108002258 in Genome Data Viewer
Location:
chromosome: LG8
Exon count:
10
Annotation release Status Assembly LG Location
RS_2023_12 current AcerK_1.0 (GCF_029169275.1) LG8 NC_083859.1 (7516140..7529521)
101 previous assembly ACSNU-2.0 (GCF_001442555.1) Unplaced Scaffold NW_016019666.1 (1..5655, complement)

Linkage Group LG8 - NC_083859.1Genomic Context describing neighboring genes Neighboring gene acetylcholinesterase Neighboring gene uncharacterized LOC133666583 Neighboring gene calcium-binding mitochondrial carrier protein Aralar1 Neighboring gene putative protein kinase C delta type homolog Neighboring gene uncharacterized LOC108003879 Neighboring gene Acyl-CoA binding protein 1 Neighboring gene ran-binding protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6-B-like; dnaJ homolog subfamily B member 6-like
Names
DnaJ subfamily B member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029169275.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AcerK_1.0 Primary Assembly

Genomic

  1. NC_083859.1 Reference AcerK_1.0 Primary Assembly

    Range
    7516140..7529521
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062078544.1 → XP_061934528.1  dnaJ homolog subfamily B member 6-B-like isoform X1

  2. XM_062078545.1 → XP_061934529.1  dnaJ homolog subfamily B member 6-like isoform X2

    UniProtKB/TrEMBL
    V9IAL1

  3. XM_062078543.1 → XP_061934527.1  dnaJ homolog subfamily B member 6-B-like isoform X1

  4. XM_062078546.1 → XP_061934530.1  dnaJ homolog subfamily B member 6-like isoform X2

    UniProtKB/TrEMBL
    V9IAL1

  5. XM_017063838.3 → XP_016919327.1  dnaJ homolog subfamily B member 6-like isoform X2

    UniProtKB/TrEMBL
    V9IAL1
    Conserved Domains (1) summary
    COG0484
    Location:2 → 112
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  6. XM_017063837.3 → XP_016919326.1  dnaJ homolog subfamily B member 6-B-like isoform X1

    Conserved Domains (2) summary
    PRK10767
    Location:3 → 172
    PRK10767; chaperone protein DnaJ; Provisional
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain
Nucleotide Protein
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