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LOC107986841 uncharacterized LOC107986841 [ Homo sapiens (human) ]

Gene ID: 107986841, updated on 22-Oct-2024

Summary

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Gene symbol
LOC107986841
Gene description
uncharacterized LOC107986841
See related
Ensembl:ENSG00000242593
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107986841 in Genome Data Viewer
Location:
7q31.33
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (124287289..124353415)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (125604020..125671280)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene transmembrane protein 229A Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26571 Neighboring gene uncharacterized LOC124901741 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26572 Neighboring gene uncharacterized LOC105375484 Neighboring gene uncharacterized LOC101928211 Neighboring gene MPRA-validated peak6707 silencer Neighboring gene MPRA-validated peak6708 silencer Neighboring gene uncharacterized LOC102724577 Neighboring gene MPRA-validated peak6710 silencer Neighboring gene MPRA-validated peak6711 silencer Neighboring gene NANOG hESC enhancer GRCh37_chr7:124085682-124086183 Neighboring gene SSU72 like 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    124287289..124353415
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002956584.2 RNA Sequence

    Related
    ENST00000769051.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    125604020..125671280
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007077849.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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