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LOC107986465 uncharacterized LOC107986465 [ Homo sapiens (human) ]

Gene ID: 107986465, updated on 17-Sep-2024

Summary

Gene symbol
LOC107986465
Gene description
uncharacterized LOC107986465
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in bone marrow (RPKM 1.1), spleen (RPKM 0.1) and 13 other tissues See more
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Genomic context

See LOC107986465 in Genome Data Viewer
Location:
5q33.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (154218156..154222433)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23471 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23472 Neighboring gene microfibril associated protein 3 Neighboring gene NANOG hESC enhancer GRCh37_chr5:153465203-153465708 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:153486570-153487566 Neighboring gene Sharpr-MPRA regulatory region 747 Neighboring gene uncharacterized LOC124901118 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:153568703-153569668 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16533 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16534 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16536 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16537 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16535 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:153582451-153582951 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 10 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:153598352-153598858 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:153598859-153599363 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23474 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16538 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23475 Neighboring gene Sharpr-MPRA regulatory region 6269 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16539 Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene 7 Neighboring gene microRNA 1294

Genomic regions, transcripts, and products

Genomic Sequence:
NC_000005.10 Chromosome 5 Reference GRCh38.p14 Primary Assembly

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    154218156..154222433
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001742939.1 RNA Sequence