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LOC107986192 uncharacterized LOC107986192 [ Homo sapiens (human) ]

Gene ID: 107986192, updated on 10-Oct-2023

Summary

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Gene symbol
LOC107986192
Gene description
uncharacterized LOC107986192
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
4q26
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (119627790..119630755)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (122932913..122935903)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (120548945..120551910)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21856 Neighboring gene septin 7 pseudogene 14 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15655 Neighboring gene phosphodiesterase 5A Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:120453269-120453878 Neighboring gene MPRA-validated peak5097 silencer Neighboring gene small nucleolar RNA SNORA11 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15656 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21857 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15657 Neighboring gene uncharacterized LOC105377397 Neighboring gene uncharacterized LOC124900920

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_165235.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC080089

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    119627790..119630755
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    122932913..122935903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases