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LINC01826 long intergenic non-protein coding RNA 1826 [ Homo sapiens (human) ]

Gene ID: 107985818, updated on 10-Oct-2023

Summary

Official Symbol
LINC01826provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1826provided by HGNC
Primary source
HGNC:HGNC:52632
See related
Ensembl:ENSG00000232740 AllianceGenome:HGNC:52632
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
lnc-MKI67IP-3
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
2q14.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (123066156..123073481, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (123501920..123509244, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (123823732..123831057, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373595 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:123685370-123685918 Neighboring gene uncharacterized LOC105373596 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:123746771-123747475 Neighboring gene MPRA-validated peak3845 silencer Neighboring gene ELOA pseudogene 1 Neighboring gene PSMD14 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_147208.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC062020
    Related
    ENST00000432894.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    123066156..123073481 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    123501920..123509244 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)