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LOC107985812 uncharacterized LOC107985812 [ Homo sapiens (human) ]

Gene ID: 107985812, updated on 17-Sep-2024

Summary

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Gene symbol
LOC107985812
Gene description
uncharacterized LOC107985812
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107985812 in Genome Data Viewer
Location:
2p14
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (66283337..66287107)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:66016952-66017452 Neighboring gene long intergenic non-protein coding RNA 2934 Neighboring gene HHc2:065915 enhancer upstream of MEIS1 Neighboring gene HHc2:065944 enhancer upstream of MEIS1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:66157143-66157642 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:66184819-66185607 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:66270681-66271880 Neighboring gene VISTA enhancer hs205 Neighboring gene uncharacterized LOC107985890 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:66397659-66398858 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:66404589-66405197 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:66470915-66471860 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:66471861-66472806 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:66475534-66476457 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:66476458-66477380 Neighboring gene E4 enhancer upstream of MEIS1 Neighboring gene Sharpr-MPRA regulatory region 4056 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:66617956-66618568 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:66618569-66619179 Neighboring gene microRNA 4778 Neighboring gene long intergenic non-protein coding RNA 1873

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000002.12 Chromosome 2 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    66283337..66287107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001739193.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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