U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107984902 sal-like protein 3 [ Homo sapiens (human) ]

Gene ID: 107984902, updated on 17-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
LOC107984902
Gene description
sal-like protein 3
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC107984902 in Genome Data Viewer
Location:
16p11.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (35023251..35026752)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102724523 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:34188397-34189273 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:34189941-34190826 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:34191252-34191773 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:34191826-34192668 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:34192669-34193511 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:34194053-34194564 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:34194565-34195074 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:34195587-34196096 Neighboring gene long intergenic non-protein coding RNA 2184 Neighboring gene Putative uncharacterized protein MGC34800 Neighboring gene cyclin Y like 3 (pseudogene) Neighboring gene clustered mitochondria homolog pseudogene 11

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000016.10 Chromosome 16 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    35023251..35026752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005647010.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases