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LOC107984766 uncharacterized LOC107984766 [ Homo sapiens (human) ]

Gene ID: 107984766, updated on 17-Sep-2024

Summary

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Gene symbol
LOC107984766
Gene description
uncharacterized LOC107984766
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107984766 in Genome Data Viewer
Location:
15q12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (27087270..27100909, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (24828846..24842496, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene TVP23B pseudogene 1 Neighboring gene gamma-aminobutyric acid type A receptor subunit gamma3 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr15:27267034-27267535 Neighboring gene uncharacterized LOC124903449 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:27284775-27285276 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:27285277-27285776 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:27297461-27297960 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr15:27302839-27304038 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:27332339-27332839 Neighboring gene GABRG3 antisense RNA 1 Neighboring gene Sharpr-MPRA regulatory region 5301 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:27438261-27438762 Neighboring gene dual specificity phosphatase 3 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    27087270..27100909 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001751460.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    24828846..24842496 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007085794.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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