U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107984236 uncharacterized LOC107984236 [ Homo sapiens (human) ]

Gene ID: 107984236, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC107984236
Gene description
uncharacterized LOC107984236
See related
Ensembl:ENSG00000289989
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 1.8), kidney (RPKM 0.3) and 6 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
10q21.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (60944374..60945266)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (61801135..61802027)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (62704132..62705024)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene Rho related BTB domain containing 1 Neighboring gene uncharacterized LOC124902432 Neighboring gene RNA, U2 small nuclear 72, pseudogene Neighboring gene uncharacterized LOC124902431 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2390 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2391 Neighboring gene Sharpr-MPRA regulatory region 5027 Neighboring gene uncharacterized LOC124902433 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3395 Neighboring gene MPRA-validated peak951 silencer Neighboring gene long intergenic non-protein coding RNA 845

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_160732.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC011197, HY010723
    Related
    ENST00000702351.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    60944374..60945266
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    61801135..61802027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases