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LOC107983983 putative V-set and immunoglobulin domain-containing-like protein IGHV4OR15-8 [ Homo sapiens (human) ]

Gene ID: 107983983, updated on 17-Sep-2024

Summary

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Gene symbol
LOC107983983
Gene description
putative V-set and immunoglobulin domain-containing-like protein IGHV4OR15-8
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in urinary bladder (RPKM 76.8), stomach (RPKM 13.6) and 6 other tissues See more
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Genomic context

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See LOC107983983 in Genome Data Viewer
Location:
15q11.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (22183503..22185493, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (19090263..19091056, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene immunoglobulin heavy variable 1/OR15-1 (non-functional) Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:22455274-22455774 Neighboring gene immunoglobulin IGHV1OR15-3-like pseudogene Neighboring gene immunoglobulin heavy variable 1/OR15-4 (pseudogene) Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6255 Neighboring gene microRNA 1268a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. A candidate antibody drug for prevention of malaria. Williams KL, et al. Nat Med, 2024 Jan. PMID 38167935, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

Genotypes

General gene information

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Homology

General protein information

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Preferred Names
putative V-set and immunoglobulin domain-containing-like protein IGHV4OR15-8; uncharacterized protein LOC107983983
Names
immunoglobulin gamma heavy chain variable region

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    22183503..22185493 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017022769.3 → XP_016878258.1  uncharacterized protein LOC107983983 isoform X1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    19090263..19091056 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054379308.1 → XP_054235283.1  putative V-set and immunoglobulin domain-containing-like protein IGHV4OR15-8 isoform X2

Nucleotide Protein
Heading Accession and Version

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