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PNPLA3 patatin like phospholipase domain containing 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 107970265, updated on 18-Sep-2024

Summary

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Official Symbol
PNPLA3provided by VGNC
Official Full Name
patatin like phospholipase domain containing 3provided by VGNC
Primary source
VGNC:VGNC:5300
Locus tag
CK820_G0027439
See related
Ensembl:ENSPTRG00000014481 Ensembl:ENSPTRG00000044988
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See PNPLA3 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 23 NC_086016.1 (45921609..45945296)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 22 NC_072420.1 (38953980..38981576)

Chromosome 23 - NC_086016.1Genomic Context describing neighboring genes Neighboring gene sulfotransferase family 4A member 1 Neighboring gene patatin like phospholipase domain containing 5 Neighboring gene large ribosomal subunit protein eL33-like Neighboring gene SAMM50 sorting and assembly machinery component Neighboring gene parvin beta Neighboring gene transfer RNA opal suppressor (anticodon UCA)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-acylglycerol-3-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-acylglycerol-3-phosphate O-acyltransferase PNPLA3
Names
patatin-like phospholipase domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086016.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    45921609..45945296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_515184.7 → XP_515184.3  1-acylglycerol-3-phosphate O-acyltransferase PNPLA3 isoform X1

    UniProtKB/TrEMBL
    A0A2J8LMP1, A0A6D2XSU3, H2R6Y4
    Related
    ENSPTRP00000085673.1
    Conserved Domains (1) summary
    cd07221
    Location:8 → 259
    Pat_PNPLA3; Patatin-like phospholipase domain containing protein 3

  2. XM_009438564.4 → XP_009436839.1  1-acylglycerol-3-phosphate O-acyltransferase PNPLA3 isoform X2

    UniProtKB/TrEMBL
    A0A2J8LMP0
    Conserved Domains (1) summary
    cd07221
    Location:8 → 255
    Pat_PNPLA3; Patatin-like phospholipase domain containing protein 3

  3. XM_009438566.4 → XP_009436841.1  1-acylglycerol-3-phosphate O-acyltransferase PNPLA3 isoform X3

    Conserved Domains (1) summary
    cd07221
    Location:8 → 259
    Pat_PNPLA3; Patatin-like phospholipase domain containing protein 3
Nucleotide Protein
Heading Accession and Version

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