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LOC107954769 UDP-arabinopyranose mutase 1 [ Gossypium hirsutum (cotton) ]

Gene ID: 107954769, updated on 12-Aug-2024

Summary

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Gene symbol
LOC107954769
Gene description
UDP-arabinopyranose mutase 1
Locus tag
ERO13_D07G175700v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107954769 in Genome Data Viewer
Location:
chromosome: D07
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) D07 NC_053443.1 (38158252..38160961, complement)

Chromosome D07 - NC_053443.1Genomic Context describing neighboring genes Neighboring gene protein NRT1/ PTR FAMILY 6.4 Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC121219074 Neighboring gene aarF domain-containing protein kinase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053443.1 Chromosome D07 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-arabinopyranose mutase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053443.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    38158252..38160961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016890436.2 → XP_016745925.1  UDP-arabinopyranose mutase 1

    UniProtKB/TrEMBL
    A0A1U8NZ47, A0A1U8P4A9
    Conserved Domains (1) summary
    PLN03180
    Location:14 → 354
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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