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LOC107952845 UDP-arabinopyranose mutase 1 [ Gossypium hirsutum (cotton) ]

Gene ID: 107952845, updated on 12-Aug-2024

Summary

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Gene symbol
LOC107952845
Gene description
UDP-arabinopyranose mutase 1
Locus tag
ERO13_A07G169300v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107952845 in Genome Data Viewer
Location:
chromosome: A07
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) A07 NC_053430.1 (57181213..57183959, complement)

Chromosome A07 - NC_053430.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene protein NRT1/ PTR FAMILY 6.4 Neighboring gene uncharacterized LOC107952844 Neighboring gene UTP--glucose-1-phosphate uridylyltransferase 1-like Neighboring gene aarF domain-containing protein kinase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053430.1 Chromosome A07 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-arabinopyranose mutase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053430.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    57181213..57183959 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016888040.2 → XP_016743529.1  UDP-arabinopyranose mutase 1

    UniProtKB/TrEMBL
    A0A1U8NZ47, A0A1U8NZZ5
    Conserved Domains (1) summary
    PLN03180
    Location:17 → 353
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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