U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107951782 disease resistance protein RPS2 [ Gossypium hirsutum (cotton) ]

Gene ID: 107951782, updated on 12-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
LOC107951782
Gene description
disease resistance protein RPS2
Locus tag
ERO13_D01G058200v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC107951782 in Genome Data Viewer
Location:
chromosome: D01
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) D01 NC_053437.1 (8590415..8596088)

Chromosome D01 - NC_053437.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121213814 Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 Neighboring gene uncharacterized LOC121213542 Neighboring gene probable NAD(P)H dehydrogenase (quinone) FQR1-like 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_053437.1 Chromosome D01 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
disease resistance protein RPS2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053437.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    8590415..8596088
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016886916.2 → XP_016742405.2  disease resistance protein RPS2

    UniProtKB/TrEMBL
    A0A1U8NTW4
    Conserved Domains (3) summary
    PLN03210
    Location:43 → 425
    PLN03210; Resistant to P. syringae 6; Provisional
    sd00031
    Location:541 → 563
    LRR_1; leucine-rich repeat [structural motif]
    NF033189
    Location:492 → 654
    internalin_A; class 1 internalin InlA

  2. XM_016886918.2 → XP_016742407.2  disease resistance protein RPS2

    UniProtKB/TrEMBL
    A0A1U8NTW4
    Conserved Domains (3) summary
    PLN03210
    Location:43 → 425
    PLN03210; Resistant to P. syringae 6; Provisional
    sd00031
    Location:541 → 563
    LRR_1; leucine-rich repeat [structural motif]
    NF033189
    Location:492 → 654
    internalin_A; class 1 internalin InlA
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases