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LOC107940990 dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase [ Gossypium hirsutum (cotton) ]

Gene ID: 107940990, updated on 12-Aug-2024

Summary

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Gene symbol
LOC107940990
Gene description
dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase
Locus tag
ERO13_D12G011100v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107940990 in Genome Data Viewer
Location:
chromosome: D12
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) D12 NC_053448.1 (1351242..1355231, complement)

Chromosome D12 - NC_053448.1Genomic Context describing neighboring genes Neighboring gene desiccation-related protein PCC13-62 Neighboring gene heat shock factor-binding protein Neighboring gene translocator protein homolog Neighboring gene alkylated DNA repair protein alkB homolog 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053448.1 Chromosome D12 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053448.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    1351242..1355231 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016874471.2 → XP_016729960.1  dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase

    UniProtKB/TrEMBL
    A0A1U8MT16
    Conserved Domains (1) summary
    pfam05208
    Location:39 → 393
    ALG3; ALG3 protein
Nucleotide Protein
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