U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107938309 alpha-L-fucosidase 2 [ Gossypium hirsutum (cotton) ]

Gene ID: 107938309, updated on 12-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
LOC107938309
Gene description
alpha-L-fucosidase 2
Locus tag
ERO13_A12G021400v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC107938309 in Genome Data Viewer
Location:
chromosome: A12
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) A12 NC_053435.1 (2865691..2871321, complement)

Chromosome A12 - NC_053435.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107938321 Neighboring gene alpha-L-fucosidase 2-like Neighboring gene uncharacterized LOC107938299 Neighboring gene methylthioribose kinase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_053435.1 Chromosome A12 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-L-fucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-L-fucosidase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053435.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    2865691..2871321 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016871410.2 → XP_016726899.1  alpha-L-fucosidase 2 isoform X1

    UniProtKB/TrEMBL
    A0A1U8MMT7
    Conserved Domains (1) summary
    pfam14498
    Location:36 → 280
    Glyco_hyd_65N_2; Glycosyl hydrolase family 65, N-terminal domain

  2. XM_016871419.2 → XP_016726908.1  alpha-L-fucosidase 2 isoform X2

    UniProtKB/TrEMBL
    A0A1U8MN17
    Conserved Domains (1) summary
    pfam14498
    Location:36 → 280
    Glyco_hyd_65N_2; Glycosyl hydrolase family 65, N-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases