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LOC107934313 beta-amylase 7 [ Gossypium hirsutum (cotton) ]

Gene ID: 107934313, updated on 12-Aug-2024

Summary

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Gene symbol
LOC107934313
Gene description
beta-amylase 7
Locus tag
ERO13_A08G131200v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107934313 in Genome Data Viewer
Location:
chromosome: A08
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) A08 NC_053431.1 (104498881..104506329, complement)

Chromosome A08 - NC_053431.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107934318 Neighboring gene uncharacterized LOC107934316 Neighboring gene putative recombination initiation defects 3 Neighboring gene signal peptide peptidase-like 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053431.1 Chromosome A08 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-amylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in polysaccharide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-amylase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053431.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    104498881..104506329 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016866714.2 → XP_016722203.1  beta-amylase 7

    UniProtKB/TrEMBL
    A0A1U8J0L6, A0A1U8M5V2
    Conserved Domains (1) summary
    cl38930
    Location:1 → 703
    AmyAc_family; Alpha amylase catalytic domain family

  2. XM_016866713.2 → XP_016722202.1  beta-amylase 7

    UniProtKB/TrEMBL
    A0A1U8J0L6, A0A1U8M5V2
    Conserved Domains (1) summary
    cl38930
    Location:1 → 703
    AmyAc_family; Alpha amylase catalytic domain family

  3. XM_016866712.2 → XP_016722201.1  beta-amylase 7

    UniProtKB/TrEMBL
    A0A1U8J0L6, A0A1U8M5V2
    Conserved Domains (1) summary
    cl38930
    Location:1 → 703
    AmyAc_family; Alpha amylase catalytic domain family
Nucleotide Protein
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