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LOC107928099 beta-galactosidase [ Gossypium hirsutum (cotton) ]

Gene ID: 107928099, updated on 12-Aug-2024

Summary

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Gene symbol
LOC107928099
Gene description
beta-galactosidase
Locus tag
ERO13_A06G175300v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107928099 in Genome Data Viewer
Location:
chromosome: A06
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) A06 NC_053429.1 (124209197..124220168, complement)

Chromosome A06 - NC_053429.1Genomic Context describing neighboring genes Neighboring gene putative disease resistance protein RGA3 Neighboring gene putative disease resistance protein RGA3 Neighboring gene DNA-directed RNA polymerase V subunit 1 Neighboring gene uncharacterized LOC107928040

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053429.1 Chromosome A06 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lactose catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of beta-galactosidase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-galactosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053429.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    124209197..124220168 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016859265.2 → XP_016714754.1  beta-galactosidase

    UniProtKB/TrEMBL
    A0A1U8LNK0, A0A1U8PUZ8
    Conserved Domains (1) summary
    PRK09525
    Location:86 → 1097
    lacZ; beta-galactosidase
Nucleotide Protein
Heading Accession and Version

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